The latest release of AllegroLayout plugin for Cytoscape 3.x is now available claiming improved layout quality and support for OpenCL instead of Nvidia CUDA. Meaning it can now support any OpenCL GPUs (Intel, Nvidia, AMD) and CPUs (intel, AMD) and leading to OpenCL-accelerated Layout that is 10x ~ 100x Faster.
The AllegroLayout plugin is a high-speed and high-quality graph layout plugin designed for large-scale networks and provides various kinds of OpenCL-accelerated force-based layout algorithms supporting edge-weighted layout. It can solve the main problem of high-running time in force-based layout algorithms by its massively parallel OpenCL implementation.
For full details of the release visit:
https://groups.google.com/forum/#!topic/cytoscape-announce/Xftim92F4S8
Image Credit: Allegroviva